apply_angle(nodes[, suffix])

Angle energy in nodes.

apply_angle_ii(nodes[, suffix])

apply_angle_linear_mixture(nodes[, suffix, ...])

Bond energy in nodes.

apply_bond(nodes[, suffix])

Bond energy in nodes.

apply_bond_gaussian(nodes[, suffix])

Bond energy in nodes.

apply_bond_ii(nodes[, suffix])

apply_bond_linear_mixture(nodes[, suffix, ...])

Bond energy in nodes.

apply_coulomb(nodes[, scaling, suffix])

apply_improper_torsion(nodes[, suffix])

Improper torsion energy in nodes.

apply_nonbonded(nodes[, scaling, suffix])

Nonbonded in nodes.

apply_torsion(nodes[, suffix])

Torsion energy in nodes.

apply_torsion_ii(nodes[, suffix])

Torsion energy in nodes.

energy_in_graph(g[, suffix, terms])

Calculate the energy of a small molecule given parameters and geometry.

energy_in_graph_ii(g[, suffix])



EnergyInGraph(*args, **kwargs)

EnergyInGraphII(*args, **kwargs)